Preparing samples for sequencing 8/7/19
E1 E2 E3 E4 E5 P1 P2 P3 P4 P5
Procedure
After the samples E1 E2 E3 E4 E5 P1 P2 P3 P4 P5 were qubited the information was used to determine the concentrations needed to create a mix with 100 ng of each primer
to determine the microliters needed using the following equation
100ng/ x ng/μl = x μl
These are the amounts calculated
| Sample | 24F | 28S | IA2 | ITS1 |
|---|---|---|---|---|
| E1 | 2.25 μl | 1.83 μl | 1.08 μl | 3.19 μl |
| E2 | 1.36 μl | 1.17 μl | 0.97 μl | 3.34 μl |
| E3 | 1.89 μl | 1.25 μl | 0.97 μl | 4.72 μl |
| E4 | 1.82 μl | 1.23 μl | 1.00 μl | 3.24 μl |
| E5 | 1.89 μl | 1.26 μl | 0.94 μl | 3.45 μl |
| P1 | 2.56 μl | 2.24 μl | 5.32 μl | 3.73 μl |
| P2 | 2.52 μl | 3.85 μl | 7.81 μl | 6.85 μl |
| P3 | 5.53 μl | 2.24 μl | 7.63 μl | 9.85 μl |
| P4 | 2.23 μl | 2.11 μl | 5.67 μl | 4.13 μl |
| P5 | 2.17 μl | 12.02μl | 10.48μl | 4.85 μl |
These amounts were added to the corresponding tubes so that each tube has 100 ng of each post PCR DNA.
For 24F E1-5 was taken from the 7-15-19 tube. P1-5 was taken from the 7-16-19 tube
For 28S E1-5 was taken from the 7-17-19 tube. P1-5 was taken from the 7-22-19
For IA2 E1-5 was taken from 7-23-19. P1 and P3-5 was taken from 7-24-19 P2 was from 7-29-19.
For ITS1 E1 E2 E3 and E5 was taken from 6-18-19 and E4 was taken from 6-19-19. P1-5 was taken from 6-19-19.
Notes
These tubes were placed in the -20°C (post PCR) freezer in a box titled “samples ready for sequencing”
- More primers can be added to these tubes before sequencing them.