23S1M13 PCR #3 6/25/19

E8 E9 E10 E11 E12 E13 E14 E15 E16 E17 E18 E19

Procedure

Samples E8 E9 E10 E11 E12 E13 E14 E15 E16 E17 E18 E19 were used in this PCR (polimerase chain reaction) reaction

First A Master Mix of water, 2x mytaq mix, 23S1M13 Primer (concentration: 10 micromolar), 23S2M13 Primer (concentration: 10 micromolar)

Component Volume for 14 reactions(+5% error)
Water 132.3 micoleters
2x mytaq mix 183.75 micoleters
23S1M13 Primer (concentration: 10 micromolar) 14.7 micoleters
23S2M13 Primer (concentration: 10 micromolar) 14.7 micoleters

24 micoleters of this master mix was added to 14 tubes For the 2 negative controls 12.5 micoleters water and 12.5 micoleters mytaq mix were added E2 was used for the positive control

1 microleter of the DNA samples was added to the coresponding tube

The samples were then placed in the thermocycler set to

Step Temperature Duration cycles
1 92°C 3:00 1
2 92°C 0:30 40
3 55°C 1:00 40
4 72°C 0:15 40
5 72°C 5:00 1
6 4°C hold -

these amplified DNA samples were then tested by making a gel

to create the Gel the following steps were taken

2g agarose and 100ml 1X TAE buffer were mixed to make a 2% agarose 100ml gel mix the mix was microwaved and swirled until there were no flakes then 1 microliters Gelgreen was added

the mix was left to cool for 5 minutes then poured into the gel mold the gel was left to harden for 30 minutes

once hardened enough Used TAE buffer was poured into the gel box to cover the mold

5 microliter aliquots of DNA samples E8 E9 E10 E11 E12 E13 E14 E15 E16 E17 E18 E19 and the two controls were made 1 microliter of 5x loading dye was added to each

First 3 microliters of the HyperLadder 100bp was added to the first well of the mold then the DNA samples were each added to the wells in the following order

Ladder E8 E9 E10 Negative Control E11 E12 P13 Positive Control (E2)
Ladder E14 E15 E16 Negative Control E17 E18 E19 Positive Control (E2)

The voltage was set to 100V and run for 60 minutes

This is the resulting Gel

06-25-19_23S1M13_Gel1

06-25-19_23S1M13_Gel2

Notes

Written on June 25, 2019